Browse of TCMCG017C17520 protein

CDS

Accession Number	TCMCG017C17520
gbkey	CDS
Protein Id	OMO89727.1
Location	complement(join(99..167,981..1033,1119..1209,1290..1371,1494..1586,1781..1902,2008..2086,2192..2238))
GeneID	InterPro:IPR007644
Organism	Corchorus olitorius
locus_tag	COLO4_19614

Protein

Length	211aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01016693.1
Definition	RNA polymerase, beta subunit, protrusion [Corchorus olitorius]
Locus_tag	COLO4_19614

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC	-
KEGG_Module	M00181        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K03021        [VIEW IN KEGG]
EC	2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] ko04623        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG] map04623        [VIEW IN KEGG] map05169        [VIEW IN KEGG]
GOs	-

Sequence

CDS:   ATGGGTCTCAAGCAAGAAGAAATACTTCTTAGTAACAATTCCATTAATTCGAATGTGGGTGAAATTCCCATTGATAAGCAAAAGCTTGCTGCTCCAATAAAATCAGCTGTTGATAAGTATCAGCTAGTTAGAGGGTTAGTGAAGCAGCACTTGGATTCATTTAACTACTTTGTTAATACTGGGATAAAGAAGATTGTTCGTGCCAATGCCATGATTGTATCGGATGTTGACCCCAGTATTTTTCTCAGGTTTAAAGATGTTAGAATTGGTGAGCCCTCCATGACGATCAATGGGGTCAGTGAAAAGATAAATCCCCATGCATGCCGGTTGTCAGACATGACGTATGCTGCACCAATATTGGTCAATATAGAGTACACTCAAGGGAGTCGTGGAGTGAAAATGAAAGCGGAAACTGTACATAAGAATGATCTTGTTATTGGAAGAATGCCCATCATGTTAAGGAGTTGTTGCTGTGTTTTATATGGAAAAGATGAAGCTGAACTTGCAAGGCTTGGTGAGTGCCCCCTTGATCCCGGTGGATATTTCATCATTAAAGGAACAGAGAAGGTGATGTTGATACAGGAACAACTTTCCAAGAATAGGATAATCATCGATGCAGATAAGAAGGGAAAGTGA

Protein:   MGLKQEEILLSNNSINSNVGEIPIDKQKLAAPIKSAVDKYQLVRGLVKQHLDSFNYFVNTGIKKIVRANAMIVSDVDPSIFLRFKDVRIGEPSMTINGVSEKINPHACRLSDMTYAAPILVNIEYTQGSRGVKMKAETVHKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVMLIQEQLSKNRIIIDADKKGK